PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0028s0016.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family G2-like
Protein Properties Length: 287aa    MW: 31147.9 Da    PI: 6.4232
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0028s0016.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like105.33.6e-331670155
              G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                         k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+vk Lt++hvkSHLQkYRl
  Kalax.0028s0016.1.p 16 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRAMGVKELTIYHVKSHLQKYRL 70
                         79****************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.8821373IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.3E-321471IPR009057Homeodomain-like
SuperFamilySSF466891.59E-171470IPR009057Homeodomain-like
TIGRFAMsTIGR015571.8E-251671IPR006447Myb domain, plants
PfamPF002491.1E-81869IPR001005SANT/Myb domain
PfamPF143791.4E-23102148IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    Send to blast
MDPLGGGNNS PSVSSKQRLR WTHELHERFV DAVAQLGGPD RATPKGVLRA MGVKELTIYH  60
VKSHLQKYRL AKYLPDSSSD GNKVDMKESG DPHSVLEDSS GMQITEALKL QMEVQKRLHE  120
QLEVQRQLQL RIEAQGKYLK KIIEEQQRLS GVLAGSSASD HASGALDCDK IDPPTPASTS  180
ELPLQEKSPK DRTVKSFSLD ESLSSPLTPD SGCNINSPLS SPCNERSAKK QRVNMDAPSA  240
MPGMGISHIL ESSLSSSYQQ PGVSSAHEQF DLPSGSSFCT DNTLPE*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00252DAPTransfer from AT2G01060Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006449962.11e-129hypothetical protein CICLE_v10015893mg
SwissprotQ8GUN53e-48PHL1_ARATH; Protein PHR1-LIKE 1
TrEMBLV4UB201e-129V4UB20_9R
STRINGVIT_00s0475g00040.t011e-127(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.12e-91G2-like family protein